Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CRC rs1038031 chr8:14021570 C/T 3.75E-6 374 9.33 25.1 21.7 KM Plot
CRC rs10409976 chr19:42075772 A/G 3.76E-7 367 22.73 19.73 13.35 KM Plot
CRC rs10455880 chr6:161812932 A/C 1.57E-10 374 8.73 22.48 22.4 KM Plot
CRC rs10455881 chr6:161813005 C/T 1.65E-10 373 22.4 22.3 8.73 KM Plot
CRC rs10455882 chr6:161813159 C/T 1.65E-10 373 22.4 22.3 8.73 KM Plot
CRC rs10455883 chr6:161813195 C/T 1.69E-10 371 22.38 22.18 8.73 KM Plot
CRC rs10455884 chr6:161813210 C/T 1.65E-10 373 22.4 22.3 8.73 KM Plot
CRC rs10471413 chr5:54674296 A/G 6.03E-5 373 22.32 23.43 9.67 KM Plot
CRC rs10471941 chr5:54606227 A/G 6.47E-5 370 22.3 22.67 9.67 KM Plot
CRC rs10471942 chr5:54670358 G/C 6.03E-5 373 22.32 23.43 9.67 KM Plot
CRC rs10471943 chr5:54672411 T/C 6.03E-5 373 22.32 23.43 9.67 KM Plot
CRC rs10471944 chr5:54672552 G/A 6.03E-5 373 22.32 23.43 9.67 KM Plot
CRC rs10499767 chr7:57842468 G/A 1.75E-5 368 23.33 20.38 11.92 KM Plot
CRC rs10507280 chr12:117898620 G/A 4.69E-5 370 21.73 24.2 24.62 KM Plot
CRC rs10513054 chr5:54659487 G/A 6.03E-5 373 22.32 23.43 9.67 KM Plot